At the 19th National Congress of the Communist Party of China, it was proposed to strengthen rural infrastructure construction, improve the rural governance system integrating autonomy, rule of law and rule of virtue, and create a social governance pattern of co-governance, co-construction and sharing. For a long time, the township government, as the most basic government organization in our country, is also the closest existence to people's life, and it is the foundation of our country. By analyzing the connotation and internal logic of the integration of the three governance, we can understand the necessity of the integration of the three governance, find out the problems existing in the implementation process of the integration of the three governance, and analyze the specific practical ways for the problems found. Correctly handle the relationship between the three governances, build and improve the rural governance system with the integration of the three governances, and promote the construction of the rural governance system as a whole.