In recent years, the Jiangxi Modern Agricultural Industrialization Consortium has developed rapidly, but due to its short development time and imperfect related laws and regulations, enterprises have many risk points in the process of connection and industrial upgrading. Based on the risk management theory, this paper conducts a field investigation of Jiangxi Chongren Maji Industrialization Consortium, and analyzes the internal control problems in its operation. Based on the risk management theory, the five elements of corporate internal control are internal environment, risk assessment, control activities, information and communication, and internal The supervision started, and an internal control system including five aspects of target setting, risk identification, risk assessment, risk response and control activities was built, and from strengthening the concept of element connection, improving the benefit connection mechanism, innovating the industrial upgrading mechanism, and encouraging technology.Two aspects of innovation have put forward safeguard measures for the smooth operation of the modern agricultural industrialization complex.