Spatio-temporal Variability of Microbial Eukaryotic Community Composition in a Large Shallow Subtropical Lake, Assessed by 18S rRNA Gene Sequences

Mei-Jun Chen ； Fei-Zhou Chen ； Bi-Ying Zhao ； Qing-Long Wu L ； Fang-Xiang Kong

《Acta Protozoologica》 48卷3期 (2009/09) Pp. 245-264

並列摘要

We investigated the spatial and temporal variability of the microbial eukaryote community composition (MECC) in Lake Taihu using 18S rRNA gene clone libraries. Samples were collected during different seasons (February, May and August in 2007) from two distinct ecological sites. A total of 695 clones from six libraries were clustered into 162 operational taxonomic unit (OTU), most of which were affiliated with cryptophyta, stramenopile, alveolata, fungi, cercozoa or chlorophyta. Overall, 74% of OTUs were ＜98% similar to any sequences in GenBank, and 56% of these were ＜95% similar to previously recovered sequences, which is indicative of undersampled taxa in freshwater ecosystems. Both sites included many unique OTUs and the MECC diversities were higher at East Bay than at Meiliang Bay. Nearly 90% of OTUs were only detected in one of three seasons, suggesting a temporal variation of MECC. Canonical correspondence analysis suggested that concentrations of total phosphorus and total dissolved nitrogen and the densities of cladocera and rotifera were the most important factors in explaining the spatio-temporal variations of MECC.

並列關鍵字

Microbial eukaryote ； 18S rRNA ； spatio-temporal variability ； Lake Taihu