Because of recent increasing demand of domestic and industrial water uses and unsatisfied water supply for different sectors during drought, Taiwan often suspends irrigation for part of irrigation areas so that agricultural water can be transferred to domestic use. Such irrigation suspension practices at large area will influence beneficial results from paddy field. For example, irrigation suspension would reduce the purifying function of water quality for paddy field. Furthermore, stream water quality in the area may also be affected. To understand the effects on stream water quality due to farmland irrigation suspension, this research selected Da-Jue Creek area as a demonstration area at the Shihmen Reservoir irrigation area. Collecting and investigation for the data for water quality of paddy field was conducted. A water quality model for analyzing the effects on river watt quality, such as EC, BOD, TN and TP, due to large-area farmland irrigation suspending is established. The results can be the references for regional water resources allocation by maintaining agricultural sustainable development and ecological conservation environment.