The river habitat effects caused by different spur dike implementations were predicted using two-dimensional habitat simulation in this study. Several peak discharges were simulated in channel without spur dike and with one or two spur dikes to predict the weighted usable area (WUA). In the San-Lin Stream case study, the maximum WUA is obtained for two spur dikes scenario. For regular stream discharge simulation, extended one meter for the second spur dike may receive the maximum WUA. For 10-year return period flood simulation, extended two meters for the second spur dike may receive the maximum WUA. For 25-year and 50-year return period flood simulation, extended three meters for the second spur dike may receive the maximum WUA.