Odontoma may be the most common odontogenic tumors and may only be discovered clinically by radiography. The recently developed dental cone beam computed tomography (CBCT) is a powerful tool for dental treatments, especially in implant, orthognathic and maxillofacial surgery. The high quality 3D images provide more detailed information and could be taken under low radial doses comparing to traditional multi-slice computed tomography (MSCT). Its supporting software provides irregular image cutting and reconstruction beyond each arch which also benefits the surgeon. We report a case of a 14 y/o boy removing complex odontoma and impacted tooth via the aid of CBCT.