Along with the trend of in semiconductor fabrication to achieve smaller pattern dimension, wafer thickness is getting thinner while the requirements for wafer surface quality is stricter. The key factors are wafer warpage and thickness variation, the larger wafer warpage and thickness variation the lower quality of the end products and even could leads causes wafer to break. Thus, there is a demand for an accurate non-contact measurement system to measure wafer thickness variation (TTV) and wafer warpage to enable stricter monitoring of the quality of produced wafers. However, every measurement technique also has physical limitation and parameters that can be measured, e.g. thickness, surface roughness, measurement time, etc. This article briefly discusses different measurement techniques and their suitable application areas, and also introduces principles of developed chromatic confocal sensor-based wafer measurement system, calibration procedure, measurement data reconciliation, and also other challenges to be tackled for future developments.