This study aims to use the frequency ratio and coverage ratio to examine the effect of Non-Tariff Measures (NTM) implementing by trade partners on Indonesian agricultural exports. Trading countries consist of the European Union, US, Japan, China, and Australia as they are major importing countries of Indonesian cocoa, nutmeg, crude palm oil, and premium rice. This study also compares the export growth rates of Indonesia and major competing countries such as India, Thailand, and Malaysia used trade data of the following year: 2000, 2002, 2003, 2005, 2007, 2010, 2011, 2012, 2013, 2014 and 2015. The year selected are to explore the impact and changes in Indonesian trade cooperation. The major findings of this study are conveyed as follows. First of all, Indonesia's trade relations with the European Union, US, Japan, China, and Australia and other partner countries dropped in 2015 and 2016. Finally, the trade cooperation with all partner countries through a series of bilateral trade negotiations, regional and multilateral have been affected, while the relationship with the European Union enhanced. This study presents the results from agricultural exports as the dependent variable and the independent variable consisting of sanitary and phytosanitary (SPS) frequency ratio and technical barriers to trade (TBT) frequency ratio, shows the results on the effect of non-tariff policies consisting of sanitary and phytosanitary (SPS) and technical barriers to trade (TBT) on the agricultural export of Indonesian to the trading partner. If the results show that a country has a high-frequency ratio value, it means that the country is very protective of its products. Meanwhile, the smaller value of the coverage ratio shows that the products not affected by the policy. Keywords: Indonesia, Non-Tariff Measures (NTM), Frequency Ratio and Coverage Ratio Analysis