透過光電化學測試揭露在不同氯視紫紅質間之氯離子-協助氫離子流動機制的差異

氯視紫紅質 (halorhodopsin, HR) 是存在於古細菌 (haloarchaea) 之中的一種七穿膜區且含視黃醛蛋白質，目前已知是一種光驅動氯離子幫浦。然而過去有研究發現，不同物種間的氯視紫紅質不完全相同，在結構和傳遞機制上存在著些微的差異。在此研究中我們使用氧化铟锡 (ITO, indium-tin oxide) 材料來測試由光驅動氫離子釋出所造成的光電流 (photocurrent) 產生之情形，發現了NpHR (halorhodopsin from Natronomonas pharaonis) 產生獨特的電流訊號，的確指出不同物種氯視紫紅質之間的不同。針對若干高度保留且和氯離子穩定相關的胺基酸進行點突變，發現特定帶電的胺基酸一旦突變後光電流訊號即消失。再者，針對光電流產生和光週期相對應的時間設計了一個可以同時測量光電流和光週期的系統。最後我們提出了三種可能的傳遞機制模型，並試圖解釋這個氯視紫紅質之間的差異。總而言之，此研究提供了一個高解析度的方法來探討氯離子-協助之氫離子傳輸的機制。

關鍵字

古細菌；氯視紫紅質；光驅動氯離子幫浦；光電流；光週期

並列摘要

Halorhodopsin (HR) is a seven-transmembrane (7TM) retinylidene protein from haloarchaea that is commonly known to function as a light-driven inward chloride pump. However, previous studies have indicated that despite the general characteristics that most HRs share, HRs from distinct species differ in many aspects. We present indium-tin oxide (ITO)-based photocurrent measurements that demonstrate light-induced signal generated by proton release, which is observed solely in NpHR through purified protein-based assays, indeed showed HRs are not all identical. Mutagenesis studies were conducted on several conserved residues considered critical for chloride stability in HRs. Intriguingly, the photocurrent signals were eliminated after specific point mutation. Furthermore, the photocurrent and various photocycle intermediates were recorded simultaneously. We summarized three possible mechanisms in attempt to explain the differences among HRs. Overall, this approach provides a high-resolution method for further investigation of the chloride-associated proton-translocation mechanism.

並列關鍵字

haloarchaea ； halorhodopsin ； light-driven chloride pump ； photocurrent ； photocycle

參考文獻

60 陳筱儒. 鹽方扁平古菌上氯視紫蛋白質光驅動離子傳遞能力之探討. 臺灣大學生化科技學系學位論文, 1-63 (2015).

13 Fu, H. Y., Lin, Y. C., Chang, Y. N., Tseng, H., Huang, C. C., Liu, K. C., Huang, C. S., Su, C. W., Weng, R. R., Lee, Y. Y., Ng, W. V. & Yang, C. S. A novel six-rhodopsin system in a single archaeon. Journal of bacteriology 192, 5866-5873 (2010).

50 Robinson, J. L., Pyzyna, B., Atrasz, R. G., Henderson, C. A., Morrill, K. L., Burd, A. M., Desoucy, E., Fogleman, R. E., 3rd, Naylor, J. B., Steele, S. M., Elliott, D. R., Leyva, K. J. & Shand, R. F. Growth kinetics of extremely halophilic archaea (family halobacteriaceae) as revealed by arrhenius plots. Journal of bacteriology 187, 923-929 (2005).

1 Robertson, C. E., Harris, J. K., Spear, J. R. & Pace, N. R. Phylogenetic diversity and ecology of environmental Archaea. Current opinion in microbiology 8, 638-642 (2005).

2 Pfeifer, F. Haloarchaea and the formation of gas vesicles. Life 5, 385-402 (2015).

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透過光電化學測試揭露在不同氯視紫紅質間之氯離子-協助氫離子流動機制的差異

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