Seed storage proteins (Glutenin & Gliadin) were used as an effective markers to assess genetic diversity among 24 wheat genotypes((14) durum wheats and (10) bread wheats) using A-PAGE and SDSPAGE and determine the genotypes that had bands which used as marker to good quality . In durm wheats, Jorjet, kechek , sham9 and kahlahadba recognised by gamma 45 and subunits (17+18) that had positive effect on the dough. In bread wheats, Abozec, Sham10, Doma32058, Doma32457, Doma4, Bohoth8 have good technology characteristics due to that have subunits (5+10). The results obtained in this study are useful in breeding programs to improve quality by selecting of the best genotypes.