This paper presents numerical results concerning the flow distribution of water cooling system in a rack. The parameters studied included the manifold configuration, flow rate, AR ratio, length of header, inlet position and gravity. The results of this research be summaried as follows: (1) The main parameters of the flow distribution are AR ratio and manifold configuration. (2) the flow distribution of the U-type configuration is more uniform than that of the Z-type. (3) the inlet position change to the vertical into the header can reduce the jet flow. (4) The phenomenon of jet flow near the inlet does not necessarily increase non-uniformity of flow distribution.