The transport of food logistics has higher requirements on the design and selection, path customer’s geographical information positioning, etc. The application of network and GIS technology in the field of logistics transportation of food will enhance the efficiency of delivering food logistics, which can lower the cost of the transportation logistic of food at the same time. This study is based on Web and GIS, taking them as the key point, through the analysis of the effect of network and GIS technology on food logistics transportation system, discussing the application of network as well as the application of GIS technology in food logistics system.