The miniaturization of biological and chemical processes is generally believed to be useful in designing airspace medicine recently. Like a lab-on-a-chip, a microchip performing multiphase material synthesis operations with integrated transducers leads to a wide use of microfluidics, creating the controllability of investigation in mass transport process that becomes more and more crucial along with increasing demand for microfluidic designs with low pressure drop. This study presents a quantitative analysis of an oil-in-water (O/W) microemulsion flow in a microfluidic T-junction for improving its formation mechanism. The experiment is based on an adjustment of flow rates that forms O/W microemulsions with different constituent ratios, resulting in changes of flow patterns. In response to the pressure drops, demonstrated periodic fluctuations are consistently shown and deeply related to the regularity of microemulsion dynamics. The response surface methodology (RSM) introduced in the modeling of microemulsion formations demonstrates well predicted results with measurement. Accordingly, the microemulsion quality and quantity can be precisely controlled by inspecting the flow properties.